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  4. Medical Examiner Infectious Deaths Surveillance Program (MED-X)
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MED-X Program

  • MED-X Home
  • Program Description
  • Case Definition
  • Protocol
  • Reporting
  • Specimen Collection
  • Statistics
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Related Topics

  • Unexplained Critical Illnesses and Deaths Home
  • Infectious Diseases A-Z
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MED-X Program

  • MED-X Home
  • Program Description
  • Case Definition
  • Protocol
  • Reporting
  • Specimen Collection
  • Statistics
  • Frequently Asked Questions
  • Resources

Related Topics

  • Unexplained Critical Illnesses and Deaths Home
  • Infectious Diseases A-Z
  • Reportable Infectious Diseases
Contact Info
Infectious Disease Epidemiology, Prevention and Control Division
651-201-5414
IDEPC Comment Form

Contact Info

Infectious Disease Epidemiology, Prevention and Control Division
651-201-5414
IDEPC Comment Form

MED-X Specimen Collection and Testing

Specimen collection, handling, kits, and shipping information.

  • Clinical Specimen Collection and Handling
    Please follow the Unexplained Critical Illness or Death specimen collection, handling, and shipping procedures.

Specimen collection kits

  • MDH provides free specimen collection kits which include a variety of containers for storing fresh tissue and viral transport media. There are coolers available for transport as well.
    • MED-X Specimen Collection Kit Request Form
      Request a MED-X Specimen Collection Kit.

Special note about bacterial cultures

  • Please process bacterial cultures separately; the MDH laboratory does not do routine bacterial cultures.

What to collect

If an autopsy is done, collect specimens and submit them for appropriate testing.

If an autopsy is done, collect specimens and submit them for appropriate testing.

Download PDF version formatted for print:
Table 3: Specimens and Testing (PDF)
 

SpecimenPossible TestingDescriptionContainer
BloodBacterial culture5ml aerobic & anaerobicUse local lab
SerumSerologic assays/Tox10mlMarble top vacutainer
NP SwabViral Culture1 swabViral transport
UrineCulture/ Antigen tests20mlOrange top, sterile
Fresh or frozen tissue from affected organsViral culture or PCR1cm cubes (can keep refrigerated up to 4 days)Clean vials
Formalin-fixed tissuesHisto-pathology, IHC, In situ hybridization PCRAll organsOrange top, sterile
Paraffin-embedded tissuesHisto-pathology, IHC, ISH, PCRAffected organs 

Collect additional specimens based on antemortem signs and symptoms, and pathologic syndromes.

Collect additional specimens based on antemortem signs and symptoms, and pathologic syndromes.

Download PDF version formatted for print:
Table 4: Additional Specimens and Testing (PDF)
 

SyndromeSpecimenDescriptionContainer
RespiratoryDeep lung swab1 swab each lungBacterial & viral transport
NeurologicCSF10mlPurple top or sterile container
GastrointestinalStool Clean vial
DermatologicSkin/soft tissue swab or tissue sample Bacterial & viral transport or clean vial
Tags
  • unexplained critical illnesses and deaths
Last Updated: 03/27/2025
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